Index

A

a (pyfebio.material.MaterialAxisVector attribute) active_contraction (pyfebio.material.TransIsoMooneyRivlinUC attribute) (pyfebio.material.TransIsoVerondaWestmannUC attribute) adaptor_re_solve (pyfebio.control.Control attribute) add_bc() (pyfebio.boundary.Boundary method) add_beam_domain() (pyfebio.meshdomains.MeshDomains method) add_constraint() (pyfebio.constraints.Constraints method) add_contact() (pyfebio.contact.Contact method) add_discrete_element() (pyfebio.discrete.Discrete method) add_discrete_material() (pyfebio.discrete.Discrete method) add_discrete_set() (pyfebio.mesh.Mesh method) add_element() (pyfebio.mesh.DiscreteSet method) (pyfebio.mesh.Elements method) (pyfebio.mesh.ElementSet method) (pyfebio.meshdata.ElementData method) add_element_data() (pyfebio.meshdata.MeshData method) (pyfebio.output.OutputLogfile method) add_element_domain() (pyfebio.mesh.Mesh method) add_element_set() (pyfebio.mesh.Mesh method) add_face_data() (pyfebio.output.OutputLogfile method) add_initial_condition() (pyfebio.initial.Initial method) add_load_curve() (pyfebio.loaddata.LoadData method) add_logfile() (pyfebio.output.Output method) add_material() (pyfebio.material.Material method) add_math_controller() (pyfebio.loaddata.LoadData method) add_nodal_load() (pyfebio.loads.Loads method) add_node() (pyfebio.mesh.Nodes method) (pyfebio.mesh.NodeSet method) (pyfebio.meshdata.NodeData method) add_node_data() (pyfebio.meshdata.MeshData method) (pyfebio.output.OutputLogfile method) add_node_domain() (pyfebio.mesh.Mesh method) add_node_set() (pyfebio.mesh.Mesh method) add_pid_controller() (pyfebio.loaddata.LoadData method) add_plotfile() (pyfebio.output.Output method) add_point() (pyfebio.loaddata.CurvePoints method) add_quad4() (pyfebio.mesh.Surface method) add_quad8() (pyfebio.mesh.Surface method) add_quad9() (pyfebio.mesh.Surface method) add_rigid_bc() (pyfebio.rigid.Rigid method) add_rigid_body_data() (pyfebio.output.OutputLogfile method) add_rigid_connector() (pyfebio.rigid.Rigid method) add_rigid_connector_data() (pyfebio.output.OutputLogfile method) add_rigid_load() (pyfebio.rigid.Rigid method) add_section() (pyfebio.model.FEBioRoot method) add_shell_domain() (pyfebio.meshdomains.MeshDomains method) add_simple_rigid_body() (pyfebio.model.Model method) add_solid() (pyfebio.material.SolidMixture method) (pyfebio.material.SolidMixtureUC method) add_solid_domain() (pyfebio.meshdomains.MeshDomains method)

add_step() (pyfebio.step.Step method) add_surface() (pyfebio.mesh.Mesh method) add_surface_load() (pyfebio.loads.Loads method) add_surface_pair() (pyfebio.mesh.Mesh method) add_tri3() (pyfebio.mesh.Surface method) add_tri6() (pyfebio.mesh.Surface method) add_var() (pyfebio.output.OutputPlotfile method) aggressiveness (pyfebio.control.TimeStepper attribute) all_bcs (pyfebio.boundary.Boundary attribute) all_constraints (pyfebio.constraints.Constraints attribute) all_contact_interfaces (pyfebio.contact.Contact attribute) all_elements (pyfebio.mesh.Elements attribute) (pyfebio.meshdata.ElementData attribute) all_initial_conditions (pyfebio.initial.Initial attribute) all_materials (pyfebio.material.Material attribute) all_nodal_loads (pyfebio.loads.Loads attribute) all_nodes (pyfebio.mesh.Nodes attribute) (pyfebio.meshdata.NodeData attribute) all_quad4 (pyfebio.mesh.Surface attribute) all_quad8 (pyfebio.mesh.Surface attribute) all_quad9 (pyfebio.mesh.Surface attribute) all_rigid_bcs (pyfebio.rigid.Rigid attribute) all_rigid_connectors (pyfebio.rigid.Rigid attribute) all_rigid_loads (pyfebio.rigid.Rigid attribute) all_steps (pyfebio.step.Step attribute) all_surface_loads (pyfebio.loads.Loads attribute) all_tri3 (pyfebio.mesh.Surface attribute) all_tri6 (pyfebio.mesh.Surface attribute) all_vars (pyfebio.output.OutputPlotfile attribute) alpha (pyfebio.material.FiberExponentialPower attribute) (pyfebio.material.FiberExponentialPowerLinear attribute) (pyfebio.material.FiberExponentialPowerUC attribute) (pyfebio.material.HolmesMowPerm attribute) (pyfebio.material.RefIsoPerm attribute) (pyfebio.material.RefOrthoPerm attribute) (pyfebio.material.SphericalFiberDistribution attribute) (pyfebio.material.SphericalFiberDistributionSBM attribute) (pyfebio.meshdomains.SolidDomain attribute) alpha0 (pyfebio.material.RefOrthoPerm attribute) (pyfebio.material.RefTransIsoPerm attribute) alphaA (pyfebio.material.RefTransIsoPerm attribute) alphaT (pyfebio.material.RefTransIsoPerm attribute) analysis (pyfebio.control.Control attribute) angtol (pyfebio.rigid.RigidConnector attribute) ascl (pyfebio.material.ActiveContraction attribute) assemble_data_string() (in module pyfebio.output) auto_penalty (pyfebio.contact.SlidingBase attribute) (pyfebio.contact.TiedBiphasic attribute) (pyfebio.contact.TiedElastic attribute) (pyfebio.rigid.RigidConnector attribute)

B

b (pyfebio.material.CFDVonMises2d attribute) (pyfebio.material.CFDVonMises3d attribute) beam_domains (pyfebio.meshdomains.MeshDomains attribute) beta (pyfebio.material.ActiveContraction attribute) (pyfebio.material.EllipsoidalFiberDistribution attribute) (pyfebio.material.EllipsoidalFiberDistributionDonnanEquilibrium attribute) (pyfebio.material.EllipsoidalFiberDistributionMooneyRivlinUC attribute) (pyfebio.material.EllipsoidalFiberDistributionNeoHookean attribute) (pyfebio.material.EllipsoidalFiberDistributionUC attribute) (pyfebio.material.EllipsoidalFiberDistributionVerondaWestmannUC attribute) (pyfebio.material.FiberExponentialPower attribute) (pyfebio.material.FiberExponentialPowerLinear attribute) (pyfebio.material.FiberExponentialPowerUC attribute) (pyfebio.material.FiberToeLinear attribute) (pyfebio.material.FiberToeLinearUC attribute) (pyfebio.material.HolmesMow attribute) (pyfebio.material.HolmesMowUC attribute) (pyfebio.material.SphericalFiberDistribution attribute) (pyfebio.material.SphericalFiberDistributionSBM attribute) (pyfebio.material.TensionCompressionNonlinearOrthoUC attribute)

body_a (pyfebio.rigid.RigidConnector attribute) body_b (pyfebio.rigid.RigidConnector attribute) bosm (pyfebio.material.DonnanEquilibrium attribute) (pyfebio.material.EllipsoidalFiberDistributionDonnanEquilibrium attribute) (pyfebio.material.PerfectOsmometer attribute) boundary (pyfebio.model.Model attribute) (pyfebio.step.StepEntry attribute)

C

c (pyfebio.material.FungOrthotropicCompressible attribute) (pyfebio.material.FungOrthotropicUC attribute) (pyfebio.material.HolzapfelGasserOgdenUC attribute) (pyfebio.material.HolzapfelGasserOgdenUnconstrained attribute) (pyfebio.rigid.RigidAngularDamper attribute) (pyfebio.rigid.RigidDamper attribute) c0 (pyfebio.material.LeeSacksUC attribute) c1 (pyfebio.material.CoupledMooneyRivlin attribute) (pyfebio.material.CoupledVerondaWestmann attribute) (pyfebio.material.EllipsoidalFiberDistributionMooneyRivlinUC attribute) (pyfebio.material.EllipsoidalFiberDistributionVerondaWestmannUC attribute) (pyfebio.material.LargePoissonRatioLigament attribute) (pyfebio.material.LeeSacksUC attribute) (pyfebio.material.Lung attribute) (pyfebio.material.MooneyRivlinUC attribute) (pyfebio.material.MooneyRivlinVonMisesFibersUC attribute) (pyfebio.material.OgdenUC attribute) (pyfebio.material.OsmoticVirialPressure attribute) (pyfebio.material.TensionCompressionNonlinearOrthoUC attribute) (pyfebio.material.TransIsoMooneyRivlin attribute) (pyfebio.material.TransIsoMooneyRivlinUC attribute) (pyfebio.material.TransIsoVerondaWestmann attribute) (pyfebio.material.TransIsoVerondaWestmannUC attribute) (pyfebio.material.UnconstrainedOgden attribute) (pyfebio.material.VerondaWestmannUC attribute) (pyfebio.material.Yeoh attribute) c2 (pyfebio.material.CoupledMooneyRivlin attribute) (pyfebio.material.CoupledVerondaWestmann attribute) (pyfebio.material.EllipsoidalFiberDistributionMooneyRivlinUC attribute) (pyfebio.material.EllipsoidalFiberDistributionVerondaWestmannUC attribute) (pyfebio.material.LargePoissonRatioLigament attribute) (pyfebio.material.LeeSacksUC attribute) (pyfebio.material.MooneyRivlinUC attribute) (pyfebio.material.MooneyRivlinVonMisesFibersUC attribute) (pyfebio.material.OgdenUC attribute) (pyfebio.material.OsmoticVirialPressure attribute) (pyfebio.material.TensionCompressionNonlinearOrthoUC attribute) (pyfebio.material.TransIsoMooneyRivlin attribute) (pyfebio.material.TransIsoMooneyRivlinUC attribute) (pyfebio.material.TransIsoVerondaWestmann attribute) (pyfebio.material.TransIsoVerondaWestmannUC attribute) (pyfebio.material.UnconstrainedOgden attribute) (pyfebio.material.VerondaWestmannUC attribute) (pyfebio.material.Yeoh attribute) c3 (pyfebio.material.FiberExponentialLinear attribute) (pyfebio.material.FiberExponentialLinearUC attribute) (pyfebio.material.Lung attribute) (pyfebio.material.MooneyRivlinVonMisesFibersUC attribute) (pyfebio.material.OgdenUC attribute) (pyfebio.material.OsmoticVirialPressure attribute) (pyfebio.material.TransIsoMooneyRivlin attribute) (pyfebio.material.TransIsoMooneyRivlinUC attribute) (pyfebio.material.TransIsoVerondaWestmann attribute) (pyfebio.material.TransIsoVerondaWestmannUC attribute) (pyfebio.material.UnconstrainedOgden attribute) (pyfebio.material.Yeoh attribute)

c4 (pyfebio.material.FiberExponentialLinear attribute) (pyfebio.material.FiberExponentialLinearUC attribute) (pyfebio.material.MooneyRivlinVonMisesFibersUC attribute) (pyfebio.material.OgdenUC attribute) (pyfebio.material.TransIsoMooneyRivlin attribute) (pyfebio.material.TransIsoMooneyRivlinUC attribute) (pyfebio.material.TransIsoVerondaWestmann attribute) (pyfebio.material.TransIsoVerondaWestmannUC attribute) (pyfebio.material.UnconstrainedOgden attribute) (pyfebio.material.Yeoh attribute) c5 (pyfebio.material.FiberExponentialLinear attribute) (pyfebio.material.FiberExponentialLinearUC attribute) (pyfebio.material.MooneyRivlinVonMisesFibersUC attribute) (pyfebio.material.OgdenUC attribute) (pyfebio.material.TransIsoMooneyRivlin attribute) (pyfebio.material.TransIsoMooneyRivlinUC attribute) (pyfebio.material.TransIsoVerondaWestmann attribute) (pyfebio.material.TransIsoVerondaWestmannUC attribute) (pyfebio.material.UnconstrainedOgden attribute) (pyfebio.material.Yeoh attribute) c6 (pyfebio.material.OgdenUC attribute) (pyfebio.material.UnconstrainedOgden attribute) (pyfebio.material.Yeoh attribute) ca0 (pyfebio.material.ActiveContraction attribute) ce (pyfebio.material.CellGrowth attribute) center_of_mass (pyfebio.material.RigidBody attribute) cF0 (pyfebio.material.DonnanEquilibrium attribute) (pyfebio.material.EllipsoidalFiberDistributionDonnanEquilibrium attribute) cmax (pyfebio.control.QuasiNewtonMethod attribute) constants (pyfebio.globals.Globals attribute) constraints (pyfebio.model.Model attribute) (pyfebio.step.StepEntry attribute) contact (pyfebio.model.Model attribute) (pyfebio.step.StepEntry attribute) contact_frac (pyfebio.contact.SlidingBiphasic attribute) control (pyfebio.model.BiphasicModel attribute) (pyfebio.model.Model attribute) (pyfebio.step.StepEntry attribute) cr (pyfebio.material.CellGrowth attribute) (pyfebio.material.OsmoticVirialPressure attribute) cutback (pyfebio.control.TimeStepper attribute) cycle_buffer (pyfebio.control.QuasiNewtonMethod attribute)

D

d (pyfebio.material.MaterialAxisVector attribute) d1 (pyfebio.material.FiberKiousisUC attribute) (pyfebio.material.Lung attribute) d2 (pyfebio.material.FiberKiousisUC attribute) d3 (pyfebio.material.Lung attribute) data (pyfebio.output.DataEntry attribute) data_type (pyfebio.meshdata.ElementData attribute) (pyfebio.meshdata.NodeData attribute) delim (pyfebio.output.DataEntry attribute) density (pyfebio.material.ArrudaBoyce attribute) (pyfebio.material.ArrudaBoyceUC attribute) (pyfebio.material.CarterHayes attribute) (pyfebio.material.CellGrowth attribute) (pyfebio.material.CoupledMooneyRivlin attribute) (pyfebio.material.CoupledVerondaWestmann attribute) (pyfebio.material.CubicCLE attribute) (pyfebio.material.EllipsoidalFiberDistributionMooneyRivlinUC attribute) (pyfebio.material.EllipsoidalFiberDistributionVerondaWestmannUC attribute) (pyfebio.material.FungOrthotropicCompressible attribute) (pyfebio.material.FungOrthotropicUC attribute) (pyfebio.material.GentCompressible attribute) (pyfebio.material.GentUC attribute) (pyfebio.material.HolmesMow attribute) (pyfebio.material.HolmesMowUC attribute) (pyfebio.material.HolzapfelGasserOgdenUC attribute) (pyfebio.material.HolzapfelGasserOgdenUnconstrained attribute) (pyfebio.material.IsotropicElastic attribute) (pyfebio.material.IsotropicHencky attribute) (pyfebio.material.LargePoissonRatioLigament attribute) (pyfebio.material.LeeSacksUC attribute) (pyfebio.material.Lung attribute) (pyfebio.material.MooneyRivlinUC attribute) (pyfebio.material.MooneyRivlinVonMisesFibersUC attribute) (pyfebio.material.MuscleUC attribute) (pyfebio.material.NaturalNeoHookean attribute) (pyfebio.material.NeoHookean attribute) (pyfebio.material.OgdenUC attribute) (pyfebio.material.OrthotropicCLE attribute) (pyfebio.material.OrthotropicElastic attribute) (pyfebio.material.PerfectOsmometer attribute) (pyfebio.material.PorousNeoHookean attribute) (pyfebio.material.RigidBody attribute) (pyfebio.material.ShenoyWang attribute) (pyfebio.material.TransIsoMooneyRivlin attribute) (pyfebio.material.TransIsoMooneyRivlinUC attribute) (pyfebio.material.TransIsoVerondaWestmann attribute) (pyfebio.material.TransIsoVerondaWestmannUC attribute) (pyfebio.material.UnconstrainedOgden attribute) (pyfebio.material.VerondaWestmannUC attribute) (pyfebio.material.Yeoh attribute)

devaiatoric_strain_energy_density (pyfebio.output.ElementDataEnum attribute) discrete (pyfebio.model.Model attribute) discrete_elements (pyfebio.discrete.Discrete attribute) discrete_materials (pyfebio.discrete.Discrete attribute) discrete_set (pyfebio.discrete.DiscreteEntry attribute) discrete_sets (pyfebio.mesh.Mesh attribute) distribution (pyfebio.material.ContinuousFiberDistribution attribute) (pyfebio.material.ContinuousFiberDistributionUC attribute) diverge_reform (pyfebio.control.Solver attribute) dmat (pyfebio.discrete.DiscreteEntry attribute) dof (pyfebio.boundary.BCPrescribedDisplacement attribute) (pyfebio.boundary.BCPrescribedShellDisplacement attribute) (pyfebio.loads.NodalLoad attribute) (pyfebio.rigid.RigidForceLoad attribute) (pyfebio.rigid.RigidMomentLoad attribute) (pyfebio.rigid.RigidPrescribed attribute) dtforce (pyfebio.control.TimeStepper attribute) dtmax (pyfebio.control.TimeStepper attribute) dtmin (pyfebio.control.TimeStepper attribute) dtol (pyfebio.control.Solver attribute) dual_proj (pyfebio.contact.Sliding2 attribute)

E

E (pyfebio.discrete.Spring attribute) (pyfebio.material.EllipsoidalFiberDistributionNeoHookean attribute) (pyfebio.material.FiberExponentialPowerLinear attribute) (pyfebio.material.FiberToeLinear attribute) (pyfebio.material.FiberToeLinearUC attribute) (pyfebio.material.HolmesMow attribute) (pyfebio.material.IsotropicElastic attribute) (pyfebio.material.IsotropicHencky attribute) (pyfebio.material.Lung attribute) (pyfebio.material.NaturalNeoHookean attribute) (pyfebio.material.NeoHookean attribute) (pyfebio.material.PorousNeoHookean attribute) (pyfebio.material.RigidBody attribute) E0 (pyfebio.material.CarterHayes attribute) E1 (pyfebio.material.FungOrthotropicCompressible attribute) (pyfebio.material.FungOrthotropicUC attribute) (pyfebio.material.OrthotropicElastic attribute) E2 (pyfebio.material.FungOrthotropicCompressible attribute) (pyfebio.material.FungOrthotropicUC attribute) (pyfebio.material.OrthotropicElastic attribute) E3 (pyfebio.material.FungOrthotropicCompressible attribute) (pyfebio.material.FungOrthotropicUC attribute) (pyfebio.material.OrthotropicElastic attribute)

Ef (pyfebio.material.ShenoyWang attribute) elastic (pyfebio.material.KinematicGrowth attribute) (pyfebio.material.PrestrainElastic attribute) (pyfebio.material.PrestrainElasticUC attribute) (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) elem_set (pyfebio.meshdata.ElementData attribute) elem_type (pyfebio.meshdomains.SolidDomain attribute) element_data (pyfebio.meshdata.MeshData attribute) (pyfebio.output.OutputLogfile attribute) element_sets (pyfebio.mesh.Mesh attribute) ElementDataEnum (class in pyfebio.output) elements (pyfebio.mesh.DiscreteSet attribute) (pyfebio.mesh.Mesh attribute) equation_order (pyfebio.control.Solver attribute) equation_scheme (pyfebio.control.Solver attribute) etol (pyfebio.control.Solver attribute) Ex (pyfebio.rigid.RigidBodyEulerAngle attribute) extend (pyfebio.loaddata.LoadCurve attribute) Ey (pyfebio.rigid.RigidBodyEulerAngle attribute) Ez (pyfebio.rigid.RigidBodyEulerAngle attribute)

F

F (pyfebio.boundary.BCPrescribedDeformation attribute) F0 (pyfebio.material.PrestrainGradient attribute) f0 (pyfebio.rigid.RigidContractileForce attribute) face_data (pyfebio.output.OutputLogfile attribute) Fc (pyfebio.globals.Constants attribute) fiber (pyfebio.material.FiberEntropyChain attribute) (pyfebio.material.FiberEntropyChainUC attribute) (pyfebio.material.FiberExponentialLinear attribute) (pyfebio.material.FiberExponentialLinearUC attribute) (pyfebio.material.FiberExponentialPower attribute) (pyfebio.material.FiberExponentialPowerLinear attribute) (pyfebio.material.FiberExponentialPowerUC attribute) (pyfebio.material.FiberKiousisUC attribute) (pyfebio.material.FiberNaturalNeoHookean attribute) (pyfebio.material.FiberNeoHookean attribute) (pyfebio.material.FiberToeLinear attribute) (pyfebio.material.FiberToeLinearUC attribute) (pyfebio.material.HolzapfelGasserOgdenUC attribute) (pyfebio.material.HolzapfelGasserOgdenUnconstrained attribute) (pyfebio.material.MuscleUC attribute) (pyfebio.material.TendonUC attribute) (pyfebio.material.TransIsoMooneyRivlin attribute) (pyfebio.material.TransIsoMooneyRivlinUC attribute) (pyfebio.material.TransIsoVerondaWestmann attribute) (pyfebio.material.TransIsoVerondaWestmannUC attribute)

fibers (pyfebio.material.ContinuousFiberDistribution attribute) (pyfebio.material.ContinuousFiberDistributionUC attribute) file (pyfebio.output.DataEntry attribute) (pyfebio.output.OutputLogfile attribute) (pyfebio.output.OutputPlotfile attribute) first_axis (pyfebio.rigid.RigidLock attribute) flip_primary (pyfebio.contact.SlidingBiphasic attribute) (pyfebio.contact.SlidingElastic attribute) flip_secondary (pyfebio.contact.SlidingBiphasic attribute) (pyfebio.contact.SlidingElastic attribute) fluid_pressure (pyfebio.output.ElementDataEnum attribute) (pyfebio.output.NodeDataEnum attribute) flux (pyfebio.loads.FluidFlux attribute) force (pyfebio.discrete.NonlinearSpring attribute) (pyfebio.rigid.RigidCableLoad attribute) (pyfebio.rigid.RigidCylindricalJoint attribute) (pyfebio.rigid.RigidFollowerForceLoad attribute) (pyfebio.rigid.RigidPrismaticJoint attribute) force_direction (pyfebio.rigid.RigidCableLoad attribute) force_penalty (pyfebio.rigid.RigidConnector attribute) format (pyfebio.output.DataEntry attribute) free_length (pyfebio.rigid.RigidSpring attribute) fric_coeff (pyfebio.contact.SlidingBiphasic attribute) (pyfebio.contact.SlidingElastic attribute) (pyfebio.contact.SlidingNodeOnFacet attribute) fric_penalty (pyfebio.contact.SlidingNodeOnFacet attribute)

G

G (pyfebio.material.GentCompressible attribute) (pyfebio.material.GentUC attribute) g0 (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) g1 (pyfebio.material.MuscleUC attribute) (pyfebio.material.TendonUC attribute) (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) G12 (pyfebio.material.FungOrthotropicCompressible attribute) (pyfebio.material.FungOrthotropicUC attribute) (pyfebio.material.OrthotropicElastic attribute) g2 (pyfebio.material.MuscleUC attribute) (pyfebio.material.TendonUC attribute) (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) G23 (pyfebio.material.FungOrthotropicCompressible attribute) (pyfebio.material.FungOrthotropicUC attribute) (pyfebio.material.OrthotropicElastic attribute) g3 (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute)

G31 (pyfebio.material.FungOrthotropicCompressible attribute) (pyfebio.material.FungOrthotropicUC attribute) (pyfebio.material.OrthotropicElastic attribute) g4 (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) g5 (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) g6 (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) gamma (pyfebio.material.CarterHayes attribute) (pyfebio.material.HolzapfelGasserOgdenUC attribute) (pyfebio.material.HolzapfelGasserOgdenUnconstrained attribute) (pyfebio.material.SphericalFiberDistributionSBM attribute) gap_offset (pyfebio.contact.TiedFacetOnFacet attribute) gaptol (pyfebio.contact.SlidingBase attribute) (pyfebio.contact.TiedBiphasic attribute) (pyfebio.contact.TiedElastic attribute) (pyfebio.rigid.RigidConnector attribute) gipt (pyfebio.material.MooneyRivlinVonMisesFibersUC attribute) globals (pyfebio.model.Model attribute) growth (pyfebio.material.KinematicGrowth attribute)

I

id (pyfebio.discrete.NonlinearSpring attribute) (pyfebio.discrete.Spring attribute) (pyfebio.loaddata.LoadCurve attribute) (pyfebio.loaddata.MathController attribute) (pyfebio.loaddata.PIDController attribute) (pyfebio.material.ArrudaBoyce attribute) (pyfebio.material.ArrudaBoyceUC attribute) (pyfebio.material.BiphasicMaterial attribute) (pyfebio.material.CarterHayes attribute) (pyfebio.material.CellGrowth attribute) (pyfebio.material.CoupledMooneyRivlin attribute) (pyfebio.material.CoupledVerondaWestmann attribute) (pyfebio.material.CubicCLE attribute) (pyfebio.material.EllipsoidalFiberDistributionDonnanEquilibrium attribute) (pyfebio.material.EllipsoidalFiberDistributionMooneyRivlinUC attribute) (pyfebio.material.EllipsoidalFiberDistributionNeoHookean attribute) (pyfebio.material.EllipsoidalFiberDistributionUC attribute) (pyfebio.material.EllipsoidalFiberDistributionVerondaWestmannUC attribute) (pyfebio.material.FungOrthotropicCompressible attribute) (pyfebio.material.FungOrthotropicUC attribute) (pyfebio.material.GentCompressible attribute) (pyfebio.material.GentUC attribute) (pyfebio.material.HolmesMow attribute) (pyfebio.material.HolmesMowUC attribute) (pyfebio.material.HolzapfelGasserOgdenUC attribute) (pyfebio.material.HolzapfelGasserOgdenUnconstrained attribute) (pyfebio.material.IsotropicElastic attribute) (pyfebio.material.IsotropicHencky attribute) (pyfebio.material.LargePoissonRatioLigament attribute) (pyfebio.material.LeeSacksUC attribute) (pyfebio.material.Lung attribute) (pyfebio.material.MooneyRivlinUC attribute) (pyfebio.material.MooneyRivlinVonMisesFibersUC attribute) (pyfebio.material.MuscleUC attribute) (pyfebio.material.NaturalNeoHookean attribute) (pyfebio.material.NeoHookean attribute) (pyfebio.material.OgdenUC attribute) (pyfebio.material.OrthotropicCLE attribute) (pyfebio.material.OrthotropicElastic attribute) (pyfebio.material.OsmoticVirialPressure attribute) (pyfebio.material.PerfectOsmometer attribute) (pyfebio.material.PorousNeoHookean attribute) (pyfebio.material.PrestrainElastic attribute) (pyfebio.material.PrestrainElasticUC attribute) (pyfebio.material.RigidBody attribute) (pyfebio.material.ShenoyWang attribute) (pyfebio.material.SolidMixture attribute) (pyfebio.material.SolidMixtureUC attribute) (pyfebio.material.SphericalFiberDistribution attribute) (pyfebio.material.SphericalFiberDistributionSBM attribute) (pyfebio.material.TendonUC attribute) (pyfebio.material.TensionCompressionNonlinearOrthoUC attribute) (pyfebio.material.TransIsoMooneyRivlin attribute) (pyfebio.material.TransIsoMooneyRivlinUC attribute) (pyfebio.material.TransIsoVerondaWestmann attribute) (pyfebio.material.TransIsoVerondaWestmannUC attribute) (pyfebio.material.UnconstrainedOgden attribute) (pyfebio.material.VerondaWestmannUC attribute) (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) (pyfebio.material.Yeoh attribute) (pyfebio.mesh.Hex20Element attribute) (pyfebio.mesh.Hex27Element attribute) (pyfebio.mesh.Hex8Element attribute) (pyfebio.mesh.Line2Element attribute) (pyfebio.mesh.Line3Element attribute) (pyfebio.mesh.Node attribute) (pyfebio.mesh.Penta6Element attribute) (pyfebio.mesh.Quad4Element attribute) (pyfebio.mesh.Quad8Element attribute) (pyfebio.mesh.Quad9Element attribute) (pyfebio.mesh.Tet10Element attribute) (pyfebio.mesh.Tet15Element attribute) (pyfebio.mesh.Tet4Element attribute) (pyfebio.mesh.Tri3Element attribute) (pyfebio.mesh.Tri6Element attribute) (pyfebio.step.StepEntry attribute)

init (pyfebio.initial.InitialPrestrain attribute) initial (pyfebio.model.Model attribute) (pyfebio.step.StepEntry attribute) insertion (pyfebio.rigid.RigidFollowerForceLoad attribute) insertion_a (pyfebio.rigid.RigidContractileForce attribute) (pyfebio.rigid.RigidDamper attribute) (pyfebio.rigid.RigidSpring attribute) insertion_b (pyfebio.rigid.RigidContractileForce attribute) (pyfebio.rigid.RigidDamper attribute) (pyfebio.rigid.RigidSpring attribute) interpolate (pyfebio.loaddata.LoadCurve attribute) iosm (pyfebio.material.PerfectOsmometer attribute) ischoric (pyfebio.material.PrestrainInSituStretch attribute) iso_stab (pyfebio.meshdomains.SolidDomain attribute) isochoric (pyfebio.constraints.ConstraintInSituStretch attribute)

J

Jm (pyfebio.material.GentCompressible attribute) (pyfebio.material.GentUC attribute) joint_axis (pyfebio.rigid.RigidCylindricalJoint attribute) joint_origin (pyfebio.rigid.RigidCylindricalJoint attribute) (pyfebio.rigid.RigidLock attribute) (pyfebio.rigid.RigidPlanarJoint attribute) (pyfebio.rigid.RigidPrismaticJoint attribute) (pyfebio.rigid.RigidRevoluteJoint attribute) (pyfebio.rigid.RigidSphericalJoint attribute)

K

k (pyfebio.material.ArrudaBoyceUC attribute) (pyfebio.material.CoupledMooneyRivlin attribute) (pyfebio.material.CoupledVerondaWestmann attribute) (pyfebio.material.EllipsoidalFiberDistributionMooneyRivlinUC attribute) (pyfebio.material.EllipsoidalFiberDistributionVerondaWestmannUC attribute) (pyfebio.material.FungOrthotropicCompressible attribute) (pyfebio.material.FungOrthotropicUC attribute) K (pyfebio.material.GentCompressible attribute) k (pyfebio.material.GentUC attribute) (pyfebio.material.HolmesMowUC attribute) (pyfebio.material.HolzapfelGasserOgdenUC attribute) (pyfebio.material.HolzapfelGasserOgdenUnconstrained attribute) (pyfebio.material.LargePoissonRatioLigament attribute) (pyfebio.material.LeeSacksUC attribute) (pyfebio.material.MooneyRivlinUC attribute) (pyfebio.material.MooneyRivlinVonMisesFibersUC attribute) (pyfebio.material.MuscleUC attribute) (pyfebio.material.OgdenUC attribute) (pyfebio.material.ShenoyWang attribute) (pyfebio.material.TendonUC attribute) (pyfebio.material.TensionCompressionNonlinearOrthoUC attribute) (pyfebio.material.TransIsoMooneyRivlin attribute) (pyfebio.material.TransIsoMooneyRivlinUC attribute) (pyfebio.material.TransIsoVerondaWestmann attribute) (pyfebio.material.TransIsoVerondaWestmannUC attribute) (pyfebio.material.VerondaWestmannUC attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) (pyfebio.material.Yeoh attribute) (pyfebio.rigid.RigidSpring attribute) k1 (pyfebio.material.HolzapfelGasserOgdenUC attribute) (pyfebio.material.HolzapfelGasserOgdenUnconstrained attribute)

k2 (pyfebio.material.HolzapfelGasserOgdenUC attribute) (pyfebio.material.HolzapfelGasserOgdenUnconstrained attribute) kappa (pyfebio.material.ArrudaBoyce attribute) (pyfebio.material.HolzapfelGasserOgdenUC attribute) (pyfebio.material.HolzapfelGasserOgdenUnconstrained attribute) kc (pyfebio.contact.ContactPotential attribute) Kd (pyfebio.loaddata.PIDController attribute) kf (pyfebio.material.MooneyRivlinVonMisesFibersUC attribute) Ki (pyfebio.loaddata.PIDController attribute) knmult (pyfebio.contact.SlidingBase attribute) (pyfebio.contact.TiedBase attribute) (pyfebio.contact.TiedBiphasic attribute) Kp (pyfebio.loaddata.PIDController attribute) ksi (pyfebio.material.ArrudaBoyce attribute) (pyfebio.material.EllipsoidalFiberDistribution attribute) (pyfebio.material.EllipsoidalFiberDistributionDonnanEquilibrium attribute) (pyfebio.material.EllipsoidalFiberDistributionMooneyRivlinUC attribute) (pyfebio.material.EllipsoidalFiberDistributionNeoHookean attribute) (pyfebio.material.EllipsoidalFiberDistributionUC attribute) (pyfebio.material.EllipsoidalFiberDistributionVerondaWestmannUC attribute) (pyfebio.material.FiberEntropyChain attribute) (pyfebio.material.FiberEntropyChainUC attribute) (pyfebio.material.FiberExponentialPower attribute) (pyfebio.material.FiberExponentialPowerUC attribute) (pyfebio.material.FiberNaturalNeoHookean attribute) (pyfebio.material.SphericalFiberDistribution attribute) (pyfebio.material.TensionCompressionNonlinearOrthoUC attribute) ksi0 (pyfebio.material.SphericalFiberDistributionSBM attribute) ktmult (pyfebio.contact.SlidingNodeOnFacet attribute)

L

l0 (pyfebio.material.ActiveContraction attribute) l1 (pyfebio.material.TendonUC attribute) l12 (pyfebio.material.OrthotropicCLE attribute) l2 (pyfebio.material.CubicCLE attribute) (pyfebio.material.TendonUC attribute) l23 (pyfebio.material.OrthotropicCLE attribute) l31 (pyfebio.material.OrthotropicCLE attribute) lam0 (pyfebio.material.FiberExponentialLinear attribute) (pyfebio.material.FiberExponentialLinearUC attribute) (pyfebio.material.FiberExponentialPower attribute) (pyfebio.material.FiberExponentialPowerLinear attribute) (pyfebio.material.FiberNaturalNeoHookean attribute) (pyfebio.material.FiberToeLinear attribute) (pyfebio.material.FiberToeLinearUC attribute) lam_c (pyfebio.material.ShenoyWang attribute) lam_max (pyfebio.material.MuscleUC attribute) (pyfebio.material.TendonUC attribute) (pyfebio.material.TransIsoMooneyRivlin attribute) (pyfebio.material.TransIsoMooneyRivlinUC attribute) (pyfebio.material.TransIsoVerondaWestmann attribute) (pyfebio.material.TransIsoVerondaWestmannUC attribute) lam_t (pyfebio.material.ShenoyWang attribute) laugon (pyfebio.constraints.ConstraintSymmetryPlane attribute) (pyfebio.contact.SlidingBase attribute) (pyfebio.contact.TiedBase attribute) (pyfebio.rigid.RigidCylindricalJoint attribute) (pyfebio.rigid.RigidRevoluteJoint attribute) lc (pyfebio.boundary.Value attribute) (pyfebio.control.TimeStepValue attribute) (pyfebio.loads.Scale attribute) (pyfebio.material.DynamicMaterialParameter attribute) (pyfebio.material.InSituStretch attribute) (pyfebio.material.PrestrainRamp attribute) (pyfebio.rigid.RigidBodyEulerAngle.X attribute) (pyfebio.rigid.RigidBodyEulerAngle.Y attribute) (pyfebio.rigid.RigidBodyEulerAngle.Z attribute) (pyfebio.rigid.RigidBodyRotationVector.X attribute) (pyfebio.rigid.RigidBodyRotationVector.Y attribute) (pyfebio.rigid.RigidBodyRotationVector.Z attribute) (pyfebio.rigid.Value attribute)

lid (pyfebio.meshdata.ElementDataElement attribute) (pyfebio.meshdata.NodeDataNode attribute) linear (pyfebio.loads.FluidFlux attribute) (pyfebio.loads.PressureLoad attribute) linear_solver (pyfebio.control.Solver attribute) lm1 (pyfebio.material.CubicCLE attribute) lm11 (pyfebio.material.OrthotropicCLE attribute) lm22 (pyfebio.material.OrthotropicCLE attribute) lm33 (pyfebio.material.OrthotropicCLE attribute) load_controllers (pyfebio.loaddata.LoadData attribute) load_data (pyfebio.model.Model attribute) load_type (pyfebio.rigid.RigidForceLoad attribute) loads (pyfebio.model.Model attribute) (pyfebio.step.StepEntry attribute) Lofl (pyfebio.material.MuscleUC attribute) logfile (pyfebio.output.Output attribute) lp1 (pyfebio.material.CubicCLE attribute) lp11 (pyfebio.material.OrthotropicCLE attribute) lp22 (pyfebio.material.OrthotropicCLE attribute) lp33 (pyfebio.material.OrthotropicCLE attribute) lsiter (pyfebio.control.Solver attribute) lsmin (pyfebio.control.Solver attribute) lstol (pyfebio.control.Solver attribute)

M

M (pyfebio.material.ExponentialIsoPerm attribute) (pyfebio.material.HolmesMowPerm attribute) m (pyfebio.material.LargePoissonRatioLigament attribute) M (pyfebio.material.RefIsoPerm attribute) (pyfebio.material.RefOrthoPerm attribute) m (pyfebio.material.ShenoyWang attribute) M0 (pyfebio.material.RefOrthoPerm attribute) (pyfebio.material.RefTransIsoPerm attribute) m1 (pyfebio.material.OgdenUC attribute) (pyfebio.material.UnconstrainedOgden attribute) m2 (pyfebio.material.OgdenUC attribute) (pyfebio.material.UnconstrainedOgden attribute) m3 (pyfebio.material.OgdenUC attribute) (pyfebio.material.UnconstrainedOgden attribute) m4 (pyfebio.material.OgdenUC attribute) (pyfebio.material.UnconstrainedOgden attribute) m5 (pyfebio.material.OgdenUC attribute) (pyfebio.material.UnconstrainedOgden attribute) m6 (pyfebio.material.OgdenUC attribute) (pyfebio.material.UnconstrainedOgden attribute) MA (pyfebio.material.RefTransIsoPerm attribute) mat (pyfebio.meshdomains.BeamDomain attribute) (pyfebio.meshdomains.ShellDomain attribute) (pyfebio.meshdomains.SolidDomain attribute) mat_axis (pyfebio.material.ContinuousFiberDistribution attribute) (pyfebio.material.ContinuousFiberDistributionUC attribute) (pyfebio.material.HolzapfelGasserOgdenUC attribute) (pyfebio.material.HolzapfelGasserOgdenUnconstrained attribute) (pyfebio.material.MooneyRivlinVonMisesFibersUC attribute) (pyfebio.material.OrthotropicElastic attribute) (pyfebio.material.TensionCompressionNonlinearOrthoUC attribute) mat_is_gt_one_float() (in module pyfebio.material) mat_is_gte_one_float() (in module pyfebio.material) mat_is_gte_two_float() (in module pyfebio.material) mat_is_lte_90_gte_0() (in module pyfebio.material) mat_is_lte_onethird_gte_zero() (in module pyfebio.material) mat_is_non_negative_float() (in module pyfebio.material) mat_is_positive_float() (in module pyfebio.material) mat_is_positive_int() (in module pyfebio.material) mat_is_positive_int_mult10() (in module pyfebio.material) mat_is_string_float_vec3() (in module pyfebio.material) mat_is_string_float_vec9() (in module pyfebio.material) material (pyfebio.model.Model attribute) math (pyfebio.discrete.NonlinearSpringForce attribute) (pyfebio.loaddata.MathController attribute) max_buffer_size (pyfebio.control.QuasiNewtonMethod attribute) max_distance (pyfebio.contact.TiedNodeOnFacet attribute) max_iters (pyfebio.constraints.ConstraintInSituStretch attribute) (pyfebio.constraints.ConstraintPrestrain attribute) max_refs (pyfebio.control.Solver attribute) max_retries (pyfebio.control.TimeStepper attribute) max_stretch (pyfebio.constraints.ConstraintInSituStretch attribute) max_ups (pyfebio.control.QuasiNewtonMethod attribute) maxaug (pyfebio.constraints.ConstraintSymmetryPlane attribute) (pyfebio.contact.SlidingBase attribute) (pyfebio.contact.TiedBase attribute) (pyfebio.rigid.RigidConnector attribute)

measure (pyfebio.discrete.NonlinearSpring attribute) mesh (pyfebio.model.Model attribute) mesh_data (pyfebio.model.Model attribute) mesh_domains (pyfebio.model.Model attribute) meshadaptor (pyfebio.model.Model attribute) min_iters (pyfebio.constraints.ConstraintInSituStretch attribute) (pyfebio.constraints.ConstraintPrestrain attribute) min_residual (pyfebio.control.Solver attribute) minaug (pyfebio.constraints.ConstraintSymmetryPlane attribute) (pyfebio.contact.SlidingBase attribute) (pyfebio.contact.TiedBase attribute) (pyfebio.rigid.RigidConnector attribute) mixture (pyfebio.loads.FluidFlux attribute) module pyfebio pyfebio.boundary pyfebio.constraints pyfebio.contact pyfebio.control pyfebio.discrete pyfebio.globals pyfebio.include pyfebio.initial pyfebio.loaddata pyfebio.loads pyfebio.material pyfebio.mesh pyfebio.meshdata pyfebio.meshdomains pyfebio.model pyfebio.module pyfebio.output pyfebio.rigid pyfebio.step module (pyfebio.model.BiphasicModel attribute) (pyfebio.model.Model attribute) moment (pyfebio.rigid.RigidCylindricalJoint attribute) (pyfebio.rigid.RigidFollowerMomentLoad attribute) (pyfebio.rigid.RigidRevoluteJoint attribute) moment_penalty (pyfebio.rigid.RigidConnector attribute) moment_x (pyfebio.rigid.RigidSphericalJoint attribute) moment_y (pyfebio.rigid.RigidSphericalJoint attribute) moment_z (pyfebio.rigid.RigidSphericalJoint attribute) MT (pyfebio.material.RefTransIsoPerm attribute) mu (pyfebio.material.ArrudaBoyceUC attribute) (pyfebio.material.CubicCLE attribute) (pyfebio.material.FiberNeoHookean attribute) (pyfebio.material.HolmesMowUC attribute) (pyfebio.material.LargePoissonRatioLigament attribute) (pyfebio.material.ShenoyWang attribute) mu1 (pyfebio.material.OrthotropicCLE attribute) mu2 (pyfebio.material.OrthotropicCLE attribute) mu3 (pyfebio.material.OrthotropicCLE attribute)

N

N (pyfebio.material.ArrudaBoyce attribute) (pyfebio.material.ArrudaBoyceUC attribute) (pyfebio.material.FiberEntropyChain attribute) (pyfebio.material.FiberEntropyChainUC attribute) n (pyfebio.material.FiberKiousisUC attribute) (pyfebio.material.ShenoyWang attribute) n_term (pyfebio.material.ArrudaBoyce attribute) (pyfebio.material.FiberEntropyChain attribute) (pyfebio.material.FiberEntropyChainUC attribute) name (pyfebio.contact.ContactPotential attribute) (pyfebio.contact.SlidingBase attribute) (pyfebio.contact.TiedBase attribute) (pyfebio.discrete.NonlinearSpring attribute) (pyfebio.discrete.Spring attribute) (pyfebio.material.ArrudaBoyce attribute) (pyfebio.material.ArrudaBoyceUC attribute) (pyfebio.material.BiphasicMaterial attribute) (pyfebio.material.CarterHayes attribute) (pyfebio.material.CellGrowth attribute) (pyfebio.material.CoupledMooneyRivlin attribute) (pyfebio.material.CoupledVerondaWestmann attribute) (pyfebio.material.CubicCLE attribute) (pyfebio.material.EllipsoidalFiberDistributionDonnanEquilibrium attribute) (pyfebio.material.EllipsoidalFiberDistributionMooneyRivlinUC attribute) (pyfebio.material.EllipsoidalFiberDistributionNeoHookean attribute) (pyfebio.material.EllipsoidalFiberDistributionUC attribute) (pyfebio.material.EllipsoidalFiberDistributionVerondaWestmannUC attribute) (pyfebio.material.FungOrthotropicCompressible attribute) (pyfebio.material.FungOrthotropicUC attribute) (pyfebio.material.GentCompressible attribute) (pyfebio.material.GentUC attribute) (pyfebio.material.HolmesMow attribute) (pyfebio.material.HolmesMowUC attribute) (pyfebio.material.HolzapfelGasserOgdenUC attribute) (pyfebio.material.HolzapfelGasserOgdenUnconstrained attribute) (pyfebio.material.IsotropicElastic attribute) (pyfebio.material.IsotropicHencky attribute) (pyfebio.material.LargePoissonRatioLigament attribute) (pyfebio.material.LeeSacksUC attribute) (pyfebio.material.Lung attribute) (pyfebio.material.MooneyRivlinUC attribute) (pyfebio.material.MooneyRivlinVonMisesFibersUC attribute) (pyfebio.material.MuscleUC attribute) (pyfebio.material.NaturalNeoHookean attribute) (pyfebio.material.NeoHookean attribute) (pyfebio.material.OgdenUC attribute) (pyfebio.material.OrthotropicCLE attribute) (pyfebio.material.OrthotropicElastic attribute) (pyfebio.material.OsmoticVirialPressure attribute) (pyfebio.material.PerfectOsmometer attribute) (pyfebio.material.PorousNeoHookean attribute) (pyfebio.material.PrestrainElastic attribute) (pyfebio.material.PrestrainElasticUC attribute) (pyfebio.material.RigidBody attribute) (pyfebio.material.ShenoyWang attribute) (pyfebio.material.SolidMixture attribute) (pyfebio.material.SolidMixtureUC attribute) (pyfebio.material.SphericalFiberDistribution attribute) (pyfebio.material.SphericalFiberDistributionSBM attribute) (pyfebio.material.TendonUC attribute) (pyfebio.material.TensionCompressionNonlinearOrthoUC attribute) (pyfebio.material.TransIsoMooneyRivlin attribute) (pyfebio.material.TransIsoMooneyRivlinUC attribute) (pyfebio.material.TransIsoVerondaWestmann attribute) (pyfebio.material.TransIsoVerondaWestmannUC attribute) (pyfebio.material.UnconstrainedOgden attribute) (pyfebio.material.VerondaWestmannUC attribute) (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) (pyfebio.material.Yeoh attribute) (pyfebio.mesh.DiscreteSet attribute) (pyfebio.mesh.Elements attribute) (pyfebio.mesh.ElementSet attribute) (pyfebio.mesh.Nodes attribute) (pyfebio.mesh.NodeSet attribute) (pyfebio.mesh.Surface attribute) (pyfebio.mesh.SurfacePair attribute) (pyfebio.meshdata.ElementData attribute) (pyfebio.meshdata.NodeData attribute) (pyfebio.meshdomains.BeamDomain attribute) (pyfebio.meshdomains.ShellDomain attribute) (pyfebio.meshdomains.SolidDomain attribute) (pyfebio.rigid.RigidConnector attribute) (pyfebio.step.StepEntry attribute)

node_data (pyfebio.meshdata.MeshData attribute) (pyfebio.output.OutputLogfile attribute) node_reloc (pyfebio.contact.SlidingBase attribute) (pyfebio.contact.TiedNodeOnFacet attribute) node_set (pyfebio.boundary.BCPrescribedDeformation attribute) (pyfebio.boundary.BCPrescribedDisplacement attribute) (pyfebio.boundary.BCPrescribedFluidPressure attribute) (pyfebio.boundary.BCPrescribedShellDisplacement attribute) (pyfebio.boundary.BCRigid attribute) (pyfebio.boundary.BCRigidDeformation attribute) (pyfebio.boundary.BCZeroDisplacement attribute) (pyfebio.boundary.BCZeroFluidPressure attribute) (pyfebio.boundary.BCZeroShellDisplacement attribute) (pyfebio.initial.InitialPrestrain attribute) (pyfebio.initial.InitialVelocity attribute) (pyfebio.meshdata.NodeData attribute) node_sets (pyfebio.mesh.Mesh attribute) NodeDataEnum (class in pyfebio.output) nodes (pyfebio.mesh.Mesh attribute) nph (pyfebio.material.GaussKronrodTrapezoidalIntegration attribute) nth (pyfebio.material.GaussKronrodTrapezoidalIntegration attribute) (pyfebio.material.TrapezoidalRuleIntegration attribute)

O

offset (pyfebio.contact.SlidingElastic attribute) offset_shells (pyfebio.contact.TiedNodeOnFacet attribute) opt_iter (pyfebio.control.TimeStepper attribute)

optimize_bw (pyfebio.control.Solver attribute) output (pyfebio.model.Model attribute) output_stride (pyfebio.control.Control attribute)

P

p (pyfebio.contact.ContactPotential attribute) P (pyfebio.globals.Constants attribute) p1 (pyfebio.material.MuscleUC attribute) p1_strain (pyfebio.output.ElementDataEnum attribute) p1_stress (pyfebio.output.ElementDataEnum attribute) p2 (pyfebio.material.MuscleUC attribute) p2_strain (pyfebio.output.ElementDataEnum attribute) p2_stress (pyfebio.output.ElementDataEnum attribute) p3_strain (pyfebio.output.ElementDataEnum attribute) p3_stress (pyfebio.output.ElementDataEnum attribute) penalty (pyfebio.constraints.ConstraintSymmetryPlane attribute) (pyfebio.contact.SlidingBase attribute) (pyfebio.contact.TiedBase attribute) perm (pyfebio.material.ConstantIsoPerm attribute) (pyfebio.material.ExponentialIsoPerm attribute) (pyfebio.material.HolmesMowPerm attribute) perm0 (pyfebio.material.RefIsoPerm attribute) (pyfebio.material.RefOrthoPerm attribute) (pyfebio.material.RefTransIsoPerm attribute) perm1 (pyfebio.material.RefIsoPerm attribute) (pyfebio.material.RefOrthoPerm attribute) perm1A (pyfebio.material.RefTransIsoPerm attribute) perm1T (pyfebio.material.RefTransIsoPerm attribute) perm2 (pyfebio.material.RefIsoPerm attribute) (pyfebio.material.RefOrthoPerm attribute) perm2A (pyfebio.material.RefTransIsoPerm attribute) perm2T (pyfebio.material.RefTransIsoPerm attribute) permeability (pyfebio.material.BiphasicMaterial attribute) phi0 (pyfebio.material.BiphasicMaterial attribute) (pyfebio.material.PorousNeoHookean attribute) phir (pyfebio.material.CellGrowth attribute) phiw0 (pyfebio.material.DonnanEquilibrium attribute) (pyfebio.material.EllipsoidalFiberDistributionDonnanEquilibrium attribute) (pyfebio.material.OsmoticVirialPressure attribute) (pyfebio.material.PerfectOsmometer attribute) plot_level (pyfebio.control.Control attribute) plot_range (pyfebio.control.Control attribute) plot_stride (pyfebio.control.Control attribute) plot_zero_state (pyfebio.control.Control attribute) plotfile (pyfebio.output.Output attribute) points (pyfebio.loaddata.CurvePoints attribute) (pyfebio.loaddata.LoadCurve attribute) pos (pyfebio.boundary.BCRigidDeformation attribute) position (pyfebio.rigid.RigidCableLoad.CablePoint attribute) prescribed_rotation (pyfebio.rigid.RigidCylindricalJoint attribute) (pyfebio.rigid.RigidPlanarJoint attribute) (pyfebio.rigid.RigidRevoluteJoint attribute) (pyfebio.rigid.RigidSphericalJoint attribute) prescribed_translation (pyfebio.rigid.RigidCylindricalJoint attribute) (pyfebio.rigid.RigidPrismaticJoint attribute) prescribed_translation_1 (pyfebio.rigid.RigidPlanarJoint attribute) prescribed_translation_2 (pyfebio.rigid.RigidPlanarJoint attribute)

pressure (pyfebio.loads.FluidPressure attribute) (pyfebio.loads.PressureLoad attribute) pressure_penalty (pyfebio.contact.Sliding2 attribute) (pyfebio.contact.SlidingBiphasic attribute) (pyfebio.contact.TiedBiphasic attribute) prestrain (pyfebio.material.PrestrainElastic attribute) (pyfebio.material.PrestrainElasticUC attribute) primary (pyfebio.mesh.SurfacePair attribute) ptol (pyfebio.contact.Sliding2 attribute) (pyfebio.contact.SlidingBiphasic attribute) (pyfebio.contact.TiedBiphasic attribute) (pyfebio.control.Solver attribute) pyfebio module pyfebio.boundary module pyfebio.constraints module pyfebio.contact module pyfebio.control module pyfebio.discrete module pyfebio.globals module pyfebio.include module pyfebio.initial module pyfebio.loaddata module pyfebio.loads module pyfebio.material module pyfebio.mesh module pyfebio.meshdata module pyfebio.meshdomains module pyfebio.model module pyfebio.module module pyfebio.output module pyfebio.rigid module pyfebio.step module

Q

qn_method (pyfebio.control.Solver attribute)

R

R (pyfebio.globals.Constants attribute) R_in (pyfebio.contact.ContactPotential attribute) R_out (pyfebio.contact.ContactPotential attribute) ramp (pyfebio.material.PrestrainGradient attribute) rb (pyfebio.boundary.BCRigid attribute) (pyfebio.rigid.RigidBodyEulerAngle attribute) (pyfebio.rigid.RigidBodyRotationVector attribute) (pyfebio.rigid.RigidFixed attribute) (pyfebio.rigid.RigidFollowerForceLoad attribute) (pyfebio.rigid.RigidFollowerMomentLoad attribute) (pyfebio.rigid.RigidForceLoad attribute) (pyfebio.rigid.RigidMomentLoad attribute) (pyfebio.rigid.RigidPrescribed attribute) refl (pyfebio.material.ActiveContraction attribute) relative (pyfebio.boundary.BCPrescribedDeformation attribute) (pyfebio.boundary.BCPrescribedDisplacement attribute) (pyfebio.boundary.BCPrescribedFluidPressure attribute) (pyfebio.boundary.BCPrescribedShellDisplacement attribute) (pyfebio.boundary.BCRigidDeformation attribute) (pyfebio.rigid.RigidCableLoad attribute) (pyfebio.rigid.RigidFollowerForceLoad attribute) (pyfebio.rigid.RigidFollowerMomentLoad attribute) (pyfebio.rigid.RigidForceLoad attribute) (pyfebio.rigid.RigidMomentLoad attribute) (pyfebio.rigid.RigidPrescribed attribute) reset (pyfebio.initial.InitialPrestrain attribute) resolution (pyfebio.material.FiniteElementIntegration attribute) rho0 (pyfebio.material.CarterHayes attribute) (pyfebio.material.SolidBoundMolecule attribute) (pyfebio.material.SphericalFiberDistributionSBM attribute)

rhomax (pyfebio.material.SolidBoundMolecule attribute) rhomin (pyfebio.material.SolidBoundMolecule attribute) rhs (pyfebio.constraints.ConstraintSymmetryPlane attribute) rigid (pyfebio.model.Model attribute) (pyfebio.step.StepEntry attribute) rigid_body_data (pyfebio.output.OutputLogfile attribute) rigid_body_id (pyfebio.rigid.RigidCableLoad.CablePoint attribute) rigid_cable_point (pyfebio.rigid.RigidCableLoad attribute) rigid_connector_data (pyfebio.output.OutputLogfile attribute) RigidBodyDataEnum (class in pyfebio.output) RigidConnectorDataEnum (class in pyfebio.output) rot (pyfebio.boundary.BCRigidDeformation attribute) rotation (pyfebio.rigid.RigidCylindricalJoint attribute) (pyfebio.rigid.RigidPlanarJoint attribute) (pyfebio.rigid.RigidRevoluteJoint attribute) rotation_axis (pyfebio.rigid.RigidPlanarJoint attribute) (pyfebio.rigid.RigidRevoluteJoint attribute) rotation_x (pyfebio.rigid.RigidSphericalJoint attribute) rotation_y (pyfebio.rigid.RigidSphericalJoint attribute) rotation_z (pyfebio.rigid.RigidSphericalJoint attribute) rtol (pyfebio.control.Solver attribute) Ru_dof (pyfebio.rigid.RigidFixed attribute) run_model() (in module pyfebio.model) Rv_dof (pyfebio.rigid.RigidFixed attribute) Rw_dof (pyfebio.rigid.RigidFixed attribute) Rx_dof (pyfebio.rigid.RigidFixed attribute) Ry_dof (pyfebio.rigid.RigidFixed attribute) Rz_dof (pyfebio.rigid.RigidFixed attribute)

S

save() (pyfebio.model.FEBioRoot method) (pyfebio.model.Model method) sbm (pyfebio.material.CarterHayes attribute) (pyfebio.material.SolidBoundMolecule attribute) (pyfebio.material.SphericalFiberDistributionSBM attribute) scale (pyfebio.boundary.BCNormalDisplacement attribute) (pyfebio.boundary.BCPrescribedDeformation attribute) (pyfebio.discrete.NonlinearSpring attribute) (pyfebio.loads.TractionLoad attribute) scheme (pyfebio.material.ContinuousFiberDistribution attribute) (pyfebio.material.ContinuousFiberDistributionUC attribute) search_radius (pyfebio.contact.Sliding2 attribute) (pyfebio.contact.SlidingBase attribute) (pyfebio.contact.SlidingBiphasic attribute) (pyfebio.contact.SlidingElastic attribute) (pyfebio.contact.TiedBiphasic attribute) (pyfebio.contact.TiedElastic attribute) search_tol (pyfebio.contact.SlidingBase attribute) (pyfebio.contact.TiedBiphasic attribute) (pyfebio.contact.TiedElastic attribute) search_tolerance (pyfebio.contact.TiedFacetOnFacet attribute) (pyfebio.contact.TiedNodeOnFacet attribute) second_axis (pyfebio.rigid.RigidLock attribute) secondary (pyfebio.mesh.SurfacePair attribute) sections (pyfebio.model.FEBioRoot attribute) seg_up (pyfebio.contact.SlidingBase attribute) shell_bottom (pyfebio.loads.PressureLoad attribute) shell_bottom_primary (pyfebio.contact.SlidingBiphasic attribute) (pyfebio.contact.SlidingElastic attribute) shell_bottom_secondary (pyfebio.contact.SlidingBiphasic attribute) (pyfebio.contact.SlidingElastic attribute) shell_domains (pyfebio.meshdomains.MeshDomains attribute) shell_thickness (pyfebio.meshdomains.ShellDomain attribute) smax (pyfebio.material.MuscleUC attribute) smooth_aug (pyfebio.contact.Sliding2 attribute) (pyfebio.contact.SlidingBiphasic attribute) (pyfebio.contact.SlidingElastic attribute) (pyfebio.contact.SlidingFacetOnFacet attribute)

smooth_fls (pyfebio.contact.SlidingBiphasic attribute) solid (pyfebio.material.BiphasicMaterial attribute) solid_domains (pyfebio.meshdomains.MeshDomains attribute) solid_list (pyfebio.material.SolidMixture attribute) (pyfebio.material.SolidMixtureUC attribute) solver (pyfebio.control.Control attribute) spa (pyfebio.material.CFDEllipsoidal attribute) spa1 (pyfebio.material.CFDElliptical attribute) spa2 (pyfebio.material.CFDElliptical attribute) special (pyfebio.contact.TiedNodeOnFacet attribute) step (pyfebio.model.Model attribute) step_size (pyfebio.control.Control attribute) strain_energy_density (pyfebio.output.ElementDataEnum attribute) stretch (pyfebio.material.PrestrainInSituStretch attribute) surface (pyfebio.boundary.BCNormalDisplacement attribute) (pyfebio.loads.PressureLoad attribute) (pyfebio.loads.TractionLoad attribute) surface_hint (pyfebio.boundary.BCNormalDisplacement attribute) surface_pair (pyfebio.contact.ContactPotential attribute) (pyfebio.contact.SlidingBase attribute) (pyfebio.contact.TiedBase attribute) surface_pairs (pyfebio.mesh.Mesh attribute) surfaces (pyfebio.mesh.Mesh attribute) sx_dof (pyfebio.boundary.BCZeroShellDisplacement attribute) sy_dof (pyfebio.boundary.BCZeroShellDisplacement attribute) symmetric_stiffness (pyfebio.contact.Sliding2 attribute) (pyfebio.contact.SlidingBiphasic attribute) (pyfebio.contact.SlidingElastic attribute) (pyfebio.contact.TiedBiphasic attribute) (pyfebio.contact.TiedElastic attribute) (pyfebio.control.Solver attribute) (pyfebio.loads.PressureLoad attribute) sz_dof (pyfebio.boundary.BCZeroShellDisplacement attribute)

T

T (pyfebio.globals.Constants attribute) t1 (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) t2 (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) t3 (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) t4 (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) t5 (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) t6 (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) tangent_scale (pyfebio.material.LeeSacksUC attribute) target (pyfebio.loaddata.PIDController attribute) tension (pyfebio.contact.SlidingElastic attribute) tension_only_nonlinear_spring() (in module pyfebio.material) text (pyfebio.boundary.Value attribute) (pyfebio.control.TimeStepValue attribute) (pyfebio.include.Include attribute) (pyfebio.loads.Scale attribute) (pyfebio.material.DynamicMaterialParameter attribute) (pyfebio.material.FiberVector attribute) (pyfebio.material.InSituStretch attribute) (pyfebio.material.MaterialParameter attribute) (pyfebio.material.PrestrainRamp attribute) (pyfebio.mesh.DiscreteElement attribute) (pyfebio.mesh.ElementSet attribute) (pyfebio.mesh.Hex20Element attribute) (pyfebio.mesh.Hex27Element attribute) (pyfebio.mesh.Hex8Element attribute) (pyfebio.mesh.Line2Element attribute) (pyfebio.mesh.Line3Element attribute) (pyfebio.mesh.Node attribute) (pyfebio.mesh.NodeSet attribute) (pyfebio.mesh.Penta6Element attribute) (pyfebio.mesh.Quad4Element attribute) (pyfebio.mesh.Quad8Element attribute) (pyfebio.mesh.Quad9Element attribute) (pyfebio.mesh.Tet10Element attribute) (pyfebio.mesh.Tet15Element attribute) (pyfebio.mesh.Tet4Element attribute) (pyfebio.mesh.Tri3Element attribute) (pyfebio.mesh.Tri6Element attribute) (pyfebio.meshdata.ElementDataElement attribute) (pyfebio.meshdata.NodeDataNode attribute) (pyfebio.output.DataEntry attribute) (pyfebio.rigid.Free attribute) (pyfebio.rigid.RigidBodyEulerAngle.X attribute) (pyfebio.rigid.RigidBodyEulerAngle.Y attribute) (pyfebio.rigid.RigidBodyEulerAngle.Z attribute) (pyfebio.rigid.RigidBodyRotationVector.X attribute) (pyfebio.rigid.RigidBodyRotationVector.Y attribute) (pyfebio.rigid.RigidBodyRotationVector.Z attribute) (pyfebio.rigid.RigidRevoluteJoint.Free attribute) (pyfebio.rigid.Value attribute) time_stepper (pyfebio.control.Control attribute) time_steps (pyfebio.control.Control attribute) tol (pyfebio.constraints.ConstraintSymmetryPlane attribute) tolerance (pyfebio.constraints.ConstraintInSituStretch attribute) (pyfebio.constraints.ConstraintPrestrain attribute) (pyfebio.contact.SlidingBase attribute) (pyfebio.contact.TiedBase attribute) (pyfebio.contact.TiedFacetOnFacet attribute) (pyfebio.contact.TiedNodeOnFacet attribute) (pyfebio.rigid.RigidConnector attribute) tp (pyfebio.material.MooneyRivlinVonMisesFibersUC attribute) traction (pyfebio.loads.TractionLoad attribute) translate_meshio() (in module pyfebio.mesh) translation (pyfebio.rigid.RigidCylindricalJoint attribute) (pyfebio.rigid.RigidPrismaticJoint attribute) translation_1 (pyfebio.rigid.RigidPlanarJoint attribute) translation_2 (pyfebio.rigid.RigidPlanarJoint attribute) translation_axis_1 (pyfebio.rigid.RigidPlanarJoint attribute) translation_axis_2 (pyfebio.rigid.RigidPlanarJoint attribute) transverse_axis (pyfebio.rigid.RigidCylindricalJoint attribute) two_pass (pyfebio.contact.SlidingBase attribute) (pyfebio.contact.TiedBiphasic attribute) (pyfebio.contact.TiedElastic attribute) type (pyfebio.boundary.BCNormalDisplacement attribute) (pyfebio.boundary.BCPrescribedDeformation attribute) (pyfebio.boundary.BCPrescribedDisplacement attribute) (pyfebio.boundary.BCPrescribedFluidPressure attribute) (pyfebio.boundary.BCPrescribedShellDisplacement attribute) (pyfebio.boundary.BCRigid attribute) (pyfebio.boundary.BCRigidDeformation attribute) (pyfebio.boundary.BCZeroDisplacement attribute) (pyfebio.boundary.BCZeroFluidPressure attribute) (pyfebio.boundary.BCZeroShellDisplacement attribute) (pyfebio.constraints.ConstraintInSituStretch attribute) (pyfebio.constraints.ConstraintPrestrain attribute) (pyfebio.constraints.ConstraintSymmetryPlane attribute) (pyfebio.contact.ContactPotential attribute) (pyfebio.contact.Sliding2 attribute) (pyfebio.contact.SlidingBiphasic attribute) (pyfebio.contact.SlidingElastic attribute) (pyfebio.contact.SlidingFacetOnFacet attribute) (pyfebio.contact.SlidingNodeOnFacet attribute) (pyfebio.contact.TiedBiphasic attribute) (pyfebio.contact.TiedElastic attribute) (pyfebio.contact.TiedFacetOnFacet attribute) (pyfebio.contact.TiedNodeOnFacet attribute) (pyfebio.control.LinearSolver attribute) (pyfebio.control.QuasiNewtonMethod attribute) (pyfebio.control.Solver attribute) (pyfebio.control.TimeStepper attribute) (pyfebio.discrete.NonlinearSpring attribute) (pyfebio.discrete.NonlinearSpringForce attribute) (pyfebio.discrete.Spring attribute) (pyfebio.initial.InitialPrestrain attribute) (pyfebio.initial.InitialVelocity attribute) (pyfebio.loaddata.LoadCurve attribute) (pyfebio.loaddata.MathController attribute) (pyfebio.loaddata.PIDController attribute) (pyfebio.loads.FluidPressure attribute) (pyfebio.loads.NodalLoad attribute) (pyfebio.loads.PressureLoad attribute) (pyfebio.loads.TractionLoad attribute) (pyfebio.material.ActiveContraction attribute) (pyfebio.material.ArrudaBoyce attribute) (pyfebio.material.ArrudaBoyceUC attribute) (pyfebio.material.BiphasicMaterial attribute) (pyfebio.material.CarterHayes attribute) (pyfebio.material.CellGrowth attribute) (pyfebio.material.CFDCircular attribute) (pyfebio.material.CFDEllipsoidal attribute) (pyfebio.material.CFDElliptical attribute) (pyfebio.material.CFDSpherical attribute) (pyfebio.material.CFDVonMises2d attribute) (pyfebio.material.CFDVonMises3d attribute) (pyfebio.material.ConstantIsoPerm attribute) (pyfebio.material.ContinuousFiberDistribution attribute) (pyfebio.material.ContinuousFiberDistributionUC attribute) (pyfebio.material.CoupledMooneyRivlin attribute) (pyfebio.material.CoupledVerondaWestmann attribute) (pyfebio.material.CubicCLE attribute) (pyfebio.material.DonnanEquilibrium attribute) (pyfebio.material.DynamicMaterialParameter attribute) (pyfebio.material.EllipsoidalFiberDistribution attribute) (pyfebio.material.EllipsoidalFiberDistributionDonnanEquilibrium attribute) (pyfebio.material.EllipsoidalFiberDistributionMooneyRivlinUC attribute) (pyfebio.material.EllipsoidalFiberDistributionNeoHookean attribute) (pyfebio.material.EllipsoidalFiberDistributionUC attribute) (pyfebio.material.EllipsoidalFiberDistributionVerondaWestmannUC attribute) (pyfebio.material.ExponentialIsoPerm attribute) (pyfebio.material.FiberEntropyChain attribute) (pyfebio.material.FiberEntropyChainUC attribute) (pyfebio.material.FiberExponentialLinear attribute) (pyfebio.material.FiberExponentialLinearUC attribute) (pyfebio.material.FiberExponentialPower attribute) (pyfebio.material.FiberExponentialPowerLinear attribute) (pyfebio.material.FiberExponentialPowerUC attribute) (pyfebio.material.FiberKiousisUC attribute) (pyfebio.material.FiberNaturalNeoHookean attribute) (pyfebio.material.FiberNeoHookean attribute) (pyfebio.material.FiberToeLinear attribute) (pyfebio.material.FiberToeLinearUC attribute) (pyfebio.material.FiberVector attribute) (pyfebio.material.FiniteElementIntegration attribute) (pyfebio.material.FungOrthotropicCompressible attribute) (pyfebio.material.FungOrthotropicUC attribute) (pyfebio.material.GaussKronrodTrapezoidalIntegration attribute) (pyfebio.material.GentCompressible attribute) (pyfebio.material.GentUC attribute) (pyfebio.material.HolmesMow attribute) (pyfebio.material.HolmesMowPerm attribute) (pyfebio.material.HolmesMowUC attribute) (pyfebio.material.HolzapfelGasserOgdenUC attribute) (pyfebio.material.HolzapfelGasserOgdenUnconstrained attribute) (pyfebio.material.InSituStretch attribute) (pyfebio.material.IsotropicElastic attribute) (pyfebio.material.IsotropicHencky attribute) (pyfebio.material.LargePoissonRatioLigament attribute) (pyfebio.material.LeeSacksUC attribute) (pyfebio.material.Lung attribute) (pyfebio.material.MaterialAxisVector attribute) (pyfebio.material.MaterialParameter attribute) (pyfebio.material.MooneyRivlinUC attribute) (pyfebio.material.MooneyRivlinVonMisesFibersUC attribute) (pyfebio.material.MuscleUC attribute) (pyfebio.material.NaturalNeoHookean attribute) (pyfebio.material.NeoHookean attribute) (pyfebio.material.OgdenUC attribute) (pyfebio.material.OrthotropicCLE attribute) (pyfebio.material.OrthotropicElastic attribute) (pyfebio.material.OsmoticVirialPressure attribute) (pyfebio.material.PerfectOsmometer attribute) (pyfebio.material.PorousNeoHookean attribute) (pyfebio.material.PrestrainElastic attribute) (pyfebio.material.PrestrainElasticUC attribute) (pyfebio.material.PrestrainGradient attribute) (pyfebio.material.PrestrainInSituStretch attribute) (pyfebio.material.RefIsoPerm attribute) (pyfebio.material.RefOrthoPerm attribute) (pyfebio.material.RefTransIsoPerm attribute) (pyfebio.material.RigidBody attribute) (pyfebio.material.ShenoyWang attribute) (pyfebio.material.SolidMixture attribute) (pyfebio.material.SolidMixtureUC attribute) (pyfebio.material.SphericalFiberDistribution attribute) (pyfebio.material.SphericalFiberDistributionSBM attribute) (pyfebio.material.TendonUC attribute) (pyfebio.material.TensionCompressionNonlinearOrthoUC attribute) (pyfebio.material.TransIsoMooneyRivlin attribute) (pyfebio.material.TransIsoMooneyRivlinUC attribute) (pyfebio.material.TransIsoVerondaWestmann attribute) (pyfebio.material.TransIsoVerondaWestmannUC attribute) (pyfebio.material.TrapezoidalRuleIntegration attribute) (pyfebio.material.UnconstrainedOgden attribute) (pyfebio.material.VerondaWestmannUC attribute) (pyfebio.material.ViscoelasticMaterial attribute) (pyfebio.material.ViscoelasticMaterialUC attribute) (pyfebio.material.Yeoh attribute) (pyfebio.mesh.Elements attribute) (pyfebio.meshdomains.BeamDomain attribute) (pyfebio.meshdomains.ShellDomain attribute) (pyfebio.meshdomains.SolidDomain attribute) (pyfebio.module.Module attribute) (pyfebio.output.OutputPlotfile attribute) (pyfebio.output.Var attribute) (pyfebio.rigid.RigidAngularDamper attribute) (pyfebio.rigid.RigidBodyEulerAngle attribute) (pyfebio.rigid.RigidBodyRotationVector attribute) (pyfebio.rigid.RigidCableLoad attribute) (pyfebio.rigid.RigidContractileForce attribute) (pyfebio.rigid.RigidCylindricalJoint attribute) (pyfebio.rigid.RigidDamper attribute) (pyfebio.rigid.RigidFixed attribute) (pyfebio.rigid.RigidFollowerForceLoad attribute) (pyfebio.rigid.RigidFollowerMomentLoad attribute) (pyfebio.rigid.RigidForceLoad attribute) (pyfebio.rigid.RigidLock attribute) (pyfebio.rigid.RigidMomentLoad attribute) (pyfebio.rigid.RigidPlanarJoint attribute) (pyfebio.rigid.RigidPrescribed attribute) (pyfebio.rigid.RigidPrismaticJoint attribute) (pyfebio.rigid.RigidRevoluteJoint attribute) (pyfebio.rigid.RigidSphericalJoint attribute) (pyfebio.rigid.RigidSpring attribute)

U

update (pyfebio.constraints.ConstraintInSituStretch attribute) (pyfebio.constraints.ConstraintPrestrain attribute)

update_penalty (pyfebio.contact.SlidingBase attribute) (pyfebio.contact.TiedBiphasic attribute) (pyfebio.contact.TiedElastic attribute)

V

v (pyfebio.material.CarterHayes attribute) (pyfebio.material.EllipsoidalFiberDistributionNeoHookean attribute) (pyfebio.material.HolmesMow attribute) (pyfebio.material.IsotropicElastic attribute) (pyfebio.material.IsotropicHencky attribute) (pyfebio.material.Lung attribute) (pyfebio.material.NaturalNeoHookean attribute) (pyfebio.material.NeoHookean attribute) (pyfebio.material.RigidBody attribute) v0 (pyfebio.material.LargePoissonRatioLigament attribute) v12 (pyfebio.material.FungOrthotropicCompressible attribute) (pyfebio.material.FungOrthotropicUC attribute) (pyfebio.material.OrthotropicElastic attribute) v23 (pyfebio.material.FungOrthotropicCompressible attribute) (pyfebio.material.FungOrthotropicUC attribute) (pyfebio.material.OrthotropicElastic attribute) v31 (pyfebio.material.FungOrthotropicCompressible attribute) (pyfebio.material.FungOrthotropicUC attribute) (pyfebio.material.OrthotropicElastic attribute)

value (pyfebio.boundary.BCPrescribedDisplacement attribute) (pyfebio.boundary.BCPrescribedFluidPressure attribute) (pyfebio.boundary.BCPrescribedShellDisplacement attribute) (pyfebio.initial.InitialVelocity attribute) (pyfebio.rigid.RigidForceLoad attribute) (pyfebio.rigid.RigidMomentLoad attribute) (pyfebio.rigid.RigidPrescribed attribute) var (pyfebio.loaddata.PIDController attribute) var_n (pyfebio.material.MooneyRivlinVonMisesFibersUC attribute) version (pyfebio.model.FEBioRoot attribute) (pyfebio.model.Model attribute) vmc (pyfebio.material.MooneyRivlinVonMisesFibersUC attribute) vx (pyfebio.rigid.RigidBodyRotationVector attribute) vy (pyfebio.rigid.RigidBodyRotationVector attribute) vz (pyfebio.rigid.RigidBodyRotationVector attribute)

X

x_acceleration (pyfebio.output.NodeDataEnum attribute) (pyfebio.output.RigidBodyDataEnum attribute) x_angular_acceleration (pyfebio.output.RigidBodyDataEnum attribute) x_angular_velocity (pyfebio.output.RigidBodyDataEnum attribute) x_coordinate (pyfebio.output.ElementDataEnum attribute) (pyfebio.output.NodeDataEnum attribute) (pyfebio.output.RigidBodyDataEnum attribute) x_displacement (pyfebio.output.NodeDataEnum attribute) x_dof (pyfebio.boundary.BCZeroDisplacement attribute) x_euler (pyfebio.output.RigidBodyDataEnum attribute) x_flux (pyfebio.output.ElementDataEnum attribute) x_force (pyfebio.output.RigidBodyDataEnum attribute) (pyfebio.output.RigidConnectorDataEnum attribute)

x_moment (pyfebio.output.RigidBodyDataEnum attribute) (pyfebio.output.RigidConnectorDataEnum attribute) x_reaction_force (pyfebio.output.NodeDataEnum attribute) x_rotation (pyfebio.output.RigidBodyDataEnum attribute) (pyfebio.output.RigidConnectorDataEnum attribute) x_strain (pyfebio.output.ElementDataEnum attribute) x_stress (pyfebio.output.ElementDataEnum attribute) x_translation (pyfebio.output.RigidConnectorDataEnum attribute) x_velocity (pyfebio.output.NodeDataEnum attribute) (pyfebio.output.RigidBodyDataEnum attribute) xy_strain (pyfebio.output.ElementDataEnum attribute) xy_stress (pyfebio.output.ElementDataEnum attribute) xz_strain (pyfebio.output.ElementDataEnum attribute) xz_stress (pyfebio.output.ElementDataEnum attribute)

Y

y_acceleration (pyfebio.output.NodeDataEnum attribute) (pyfebio.output.RigidBodyDataEnum attribute) y_angular_acceleration (pyfebio.output.RigidBodyDataEnum attribute) y_angular_velocity (pyfebio.output.RigidBodyDataEnum attribute) y_coordinate (pyfebio.output.ElementDataEnum attribute) (pyfebio.output.NodeDataEnum attribute) (pyfebio.output.RigidBodyDataEnum attribute) y_displacement (pyfebio.output.NodeDataEnum attribute) y_dof (pyfebio.boundary.BCZeroDisplacement attribute) y_euler (pyfebio.output.RigidBodyDataEnum attribute) y_flux (pyfebio.output.ElementDataEnum attribute) y_force (pyfebio.output.RigidBodyDataEnum attribute) (pyfebio.output.RigidConnectorDataEnum attribute)

y_moment (pyfebio.output.RigidBodyDataEnum attribute) (pyfebio.output.RigidConnectorDataEnum attribute) y_reaction_force (pyfebio.output.NodeDataEnum attribute) y_rotation (pyfebio.output.RigidBodyDataEnum attribute) (pyfebio.output.RigidConnectorDataEnum attribute) y_strain (pyfebio.output.ElementDataEnum attribute) y_stress (pyfebio.output.ElementDataEnum attribute) y_translation (pyfebio.output.RigidConnectorDataEnum attribute) y_velocity (pyfebio.output.NodeDataEnum attribute) (pyfebio.output.RigidBodyDataEnum attribute) yz_strain (pyfebio.output.ElementDataEnum attribute) yz_stress (pyfebio.output.ElementDataEnum attribute)

Z

z_acceleration (pyfebio.output.NodeDataEnum attribute) (pyfebio.output.RigidBodyDataEnum attribute) z_angular_acceleration (pyfebio.output.RigidBodyDataEnum attribute) z_angular_velocity (pyfebio.output.RigidBodyDataEnum attribute) z_coordinate (pyfebio.output.ElementDataEnum attribute) (pyfebio.output.NodeDataEnum attribute) (pyfebio.output.RigidBodyDataEnum attribute) z_displacement (pyfebio.output.NodeDataEnum attribute) z_dof (pyfebio.boundary.BCZeroDisplacement attribute) z_euler (pyfebio.output.RigidBodyDataEnum attribute) z_flux (pyfebio.output.ElementDataEnum attribute)

z_force (pyfebio.output.RigidBodyDataEnum attribute) (pyfebio.output.RigidConnectorDataEnum attribute) z_moment (pyfebio.output.RigidBodyDataEnum attribute) (pyfebio.output.RigidConnectorDataEnum attribute) z_reaction_force (pyfebio.output.NodeDataEnum attribute) z_rotation (pyfebio.output.RigidBodyDataEnum attribute) (pyfebio.output.RigidConnectorDataEnum attribute) z_strain (pyfebio.output.ElementDataEnum attribute) z_stress (pyfebio.output.ElementDataEnum attribute) z_translation (pyfebio.output.RigidConnectorDataEnum attribute) z_velocity (pyfebio.output.NodeDataEnum attribute) (pyfebio.output.RigidBodyDataEnum attribute)